ReoID

Phylogenetic sequence analysis and improved diagnostic assay systems for viruses of the family Reoviridae

 

Edited by Peter. P. C. Mertens and Houssam Attoui

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Isolates of Orthoreovirus

in the dsRNA virus collection at  IAH Pirbright

 

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The accession numbers shown in red are for full length genome segment  sequences submitted to EMBL, which have not yet been activated

Family: ReoviridaeGenus: Orthoreovirus, 

 *IAH dsRNA virus collection number

 

( ICTVdb isolate Accession Number)

Virus genus

Species

&

Serotype

 

 (identification method)

Place of original sample eg country town

 [grid reference]

 

 (date original sample was taken)

Isolated from which host species e.g cow, sheep, etc

 

(Date of virus isolation, where, by whom)

Position of storage in reference freezers

 

 (Date added to collection)

Suppliers

Isolate Designation

Original sample material,

 

 Adapted to which cell types 

 

(Passage history of sample)

 

[IAH passage history]

* Original sample supplied to the collection by person / institution

 

[IAH, ISIS sample number]

Comments

 References &  accession numbers  

MOR2004/01

Identified as  Orthoreovirus by AGE comparison to Ndelle virus

Sefrou

 (centre of Morocco)

Sheep

Shelf B2, boxB2β,

rows G1-H10

 

(16/Mar/2005)

 

BTV/SEF

blood

 

[IAH-E1/BHK3]

 

Dr Mehdi El Harrak

 

Virology department

Biopharma Laboratory

BP4569 Rabat Akkari

Morocco

Originally supplied as probable BTV-4 ,

see OIE report 5th November 2004

 

CAR1974/01

Mammalian orthoreovirus

 

(identified by Nucleotide sequence analysis)

Camaroon  (05/08/1974)

Rodent  (Mus musculoides)

Shelf B2, boxB2β,

rows I1-J10

 

(30/09/2002)

Ndelle virus

 

 DAK AN Y 1444 M23654 PYSM)

BHK

 

 [IAH- BHK4]

 

Attoui et al 2001

Zeller et al 1989

 

[Seg-1:  AF368033]

[Seg-5: AF368034]

[Seg-7:   AF368035]

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IND1997/02

Mammalian orthoreovirus

 

(identified by AGE then  Nucleotide sequence analysis)

Tirunelveli district of Tamilnadu, India

(1997)

  (22/04/2002) (R7/02) BHK

(Egg isolate Vero30 BHK2)

G. Dhinakar Raj & K. Nachimuthu

 

Seg-1 to -10 sequenced by Sushila Maan and Alan Samuel  
                   
                   
                   

*IAH dsRNA virus collection number: [Country code, year / sample number] rrrr = reference strain vvvv = vaccine strain]

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(ReoID :  Edited by Peter. P. C. Mertens and  Houssam Attoui)